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Original articles in indexed journals - Systems Pharmacology

Anto JM, Bousquet J, Akdis M, Auffray C, Keil T, Momas I, Postma DS, Valenta R, Wickman M, Cambon-Thomsen A, Haahtela T, Lambrecht BN, Lodrup Carlsen KC, Koppelman GH, Sunyer J, Zuberbier T, Annesi-Maesano I, Arno A, Bindslev-Jensen C, De Carlo G, Forastiere F, Heinrich J, Kowalski ML, Maier D, Melén E, Smit HA, Standl M, Wright J, Asarnoj A, Benet M, Ballardini N, Garcia-Aymerich J, Gehring U, Guerra S, Hohmann C, Kull I, Lupinek C, Pinart M, Skrindo I, Westman M, Smagghe D, Akdis C, Andersson N, Bachert C, Ballereau S, Ballester F, Basagana X, Bedbrook A, Bergstrom A, von Berg A, Brunekreef B, Burte E, Carlsen KH, Chatzi L, Coquet JM, Curin M, Demoly P, Eller E, Fantini MP, von Hertzen L, Hovland V, Jacquemin B, Just J, Keller T, Kiss R, Kogevinas M, Koletzko S, Lau S, Lehmann I, Lemonnier N, Mäkelä M, Mestres J, Mowinckel P, Nadif R, Nawijn MC, Pellet J, Pin I, Porta D, Rancière F, Rial-Sebbag E, Saeys Y, Schuijs MJ, Siroux V, Tischer CG, Torrent M, Varraso R, Wenzel K, Xu CJ. Mechanisms of the Development of Allergy (MeDALL): Introducing novel concepts in allergy phenotypes. J Allergy Clin Immun, 2017; 139(2): 388-399 . PMID: 28183433 . DOI: 10.1016/j.jaci.2016.12.940.

2017

PhD Thesis - Systems Pharmacology

Olivés J. Endogenous Metabolites in Drug Discovery: from Plants to Human. Universitat Pompeu Fabra. January, 30th 2017. Thesis Director: Mestres J.

2017

PhD Thesis - Evolutionary Genomics

Ruiz-Orera J. ​U​nderstanding the mechanisms of de novo gene evolution using transcriptomics data. Universitat Pompeu Fabra. January, 19th 2017. Thesis Director: Albà M.

2017

Original articles in indexed journals - Evolutionary Genomics

Domazet-Loso T, Carvunis AR, Albà MM, Sestak MS, Bakaric R, Neme R, Tautz D. No evidence for phylostratigraphic bias impacting inferences on patterns of gene emergence and evolution. Mol Biol Evol, 2017 . PMID: 28087778 .

2017

Original articles in indexed journals - Integrative Biomedical Informatics - Structural Bioinformatics

Piñero J, Bravo A, Queralt-Rosinach N, Gutierrez-Sacristan A, Deu-Pons J, Centeno E, Garcia-Garcıa J, Sanz F, Furlong LI. DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants. Nucleic Acids Research, 2017; 45: D833-D839 . PMID: 27924018 . DOI: 10.1093/nar/gkw943.

2017

Original articles in indexed journals - Integrative Biomedical Informatics - Structural Bioinformatics

Piñero J, Bravo A, Queralt-Rosinach N, Gutierrez-Sacristan A, Deu-Pons J, Centeno E, Garcia-Garcıa J, Sanz F, Furlong LI. DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants. Nucleic Acids Research, 2017; 45: D833-D839 . PMID: 27924018 . DOI: 10.1093/nar/gkw943.

2017

Other - Computational RNA Biology

Singh B, Eyras E. The role of alternative splicing in cancer. Transcription, 2016 . PMID: 28005460 .

2016

Original articles in indexed journals - Integrative Biomedical Informatics

Roberto G, Leal I, Sattar N, Stewart R, Garcia-Gil M, Avillach P, Egger P, van Wijngaarden R, Ansell D, Reisberg S, Pasqua A, Pedersen L, Tramontan L, Mayer MA, Duarte T, Herings R, Coloma P, Lapi F, Sturkenboom M, van der Lei J, Schuemie M, Rijnbeek P, Gini R. Standardizing Diversity of Event Definitions in Federated Networks of Heterogeneous Health Data Sources: The "Component Algorithm Strategy". Pharmacoepidem DR S, 2016; 25: 165-166; S3

2016

Original articles in indexed journals - Evolutionary Genomics

Abascal F, Corvelo A, Cruz F, Villanueva-Cañas JL, Vlasova A, Marcet-Houben M, Martínez-Cruz B, Cheng JY, Prieto P, Quesada V, Quilez J, Li G10, García F, Rubio-Camarillo M, Frias L, Ribeca P, Capella-Gutiérrez S, Rodríguez JM, Câmara F, Lowy E, Cozzuto L, Erb I, Tress ML, Rodriguez-Ales JL, Ruiz-Orera J, Reverter F, Casas-Marce M, Soriano L, Arango JR, Derdak S, Galán B, Blanc J, Gut M, Lorente-Galdos B, Andrés-Nieto M, López-Otín C, Valencia A, Gut I, García JL, Guigó R, Murphy WJ, Ruiz-Herrera A, Marques-Bonet T, Roma G, Notredame C, Mailund T, Albà MM, Gabaldón T, Alioto T, Godoy JA. Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx. Genome Biol, 2016; 14; 17(1): 251 . PMID: 27964752 . DOI: 10.1186/s13059-016-1090-1.

2016

Original articles in indexed journals - Computational RNA Biology

Llorian M, Gooding C, Bellora N, Hallegger M, Buckroyd A, Wang X, Rajgor D, Kayikci M, Feltham J, Ule J, Eyras E, Smith CWJ. The alternative splicing program of differentiated smooth muscle cells involves concerted non-productive splicing of post-transcriptional regulators. Nucleic Acids Res, 2016; 44 (18): 8933-8950 . PMID: 27317697 . DOI: 10.1093/nar/gkw560 OCT 14 2016.

2016



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