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Original articles in indexed journals - Computational Biophysics

Ferruz N, Tresadern G, Pineda-Lucena A, De Fabritiis G. Multibody cofactor and substrate molecular recognition in the myo-inositol monophosphatase enzyme. Sci Rep, 2016; 6: 30275 . PMID: 27440438 . DOI: 10.1038/srep30275.

2016

Original articles in indexed journals - Integrative Biomedical Informatics

Digles D, Zdrazil B, Neefs JM, Van Vlijmen H, Herhaus C, Caracoti A. Brea J, Roibas B, Loza MI, Queralt-Rosinach N, Furlong LI, Gaulton A, Bartek L, Senger S, Chichester C, Engkvist O, Evelo CT, Franklin NI, Marren D, Ecker GF, Jacoby E. Open PHACTS computational protocols for in silico target validation of cellular phenotypic screens: knowing the knowns. MEDCHEMCOMM, 7 (6): 1237-1244 DOI: 10.1039/c6md00065g 2016.

2016

Original articles in indexed journals - Structural Bioinformatics

Poglayen D, Marín-López MA, Bonet J, Fornes O, Garcia-Garcia J, Planas-Iglesias J, Segura J, Oliva B, Fernandez-Fuentes N. InteractoMIX: a suite of computational tools to exploit interactomes in biological and clinical research. Biochem Soc Trans, 2016; 44(3): 917-24 . PMID: 27284060 . DOI: 10.1042/BST20150001.

2016

Original articles in indexed journals - Integrative Biomedical Informatics

Queralt-Rosinach N, Piñero J, Bravo A, Sanz F, Furlong LI. DisGeNET-RDF: Harnessing the Innovative Power of the Semantic Web to Explore the Genetic Basis of Diseases. Bioinformatics, 2016; 32(14): 2236-8 . PMID: 27153650 . DOI: 10.1093/bioinformatics/btw214.

2016

Original articles in indexed journals - Structural Bioinformatics

Alvarez-Cienfuegos A, Nuñez-Prado N, Compte M, Cuesta AM, Blanco-Toribio A, Harwood SL, Villate M, Merino N, Bonet J, Navarro R, Muñoz-Briones C, Sørensen KM, Mølgaard K, Oliva B, Sanz L, Blanco FJ, Alvarez-Vallina L. Intramolecular trimerization, a novel strategy for making multispecific antibodies with controlled orientation of the antigen binding domains. Sci Rep, 2016; 6: 28643 . PMID: 27345490 . DOI: 10.1038/srep28643.

2016

Original articles in indexed journals - Integrative Biomedical Informatics

Bravo A, Li TS, Su AI, Good BM, Furlong LI. Combining machine learning, crowdsourcing and expert knowledge to detect chemical-induced diseases in text. Database (Oxford) 2016 . PMID: 27307137 . DOI: 10.1093/database/baw094.

2016

Original articles in indexed journals - Structural Bioinformatics

Wright R, Lioutas A, Le Dily F, Soronellas D, Pohl A, Bonet J, Nacht AS, Samino S, Puchades Carrasco L, Font-Mateu J, Vicent GP, Wierer M, Trabado MA, Schelhorn C, Carolis C, Macias MJ, Yanes O, Oliva B, Beato M. ADP-ribose-derived nuclear ATP synthesis by NUDIX5 is required for chromatin remodeling. Science, 2016; 352 (6290), 1221-1225 . PMID: 27257257 . DOI: 10.1126/ science. aad9335.

2016

Original articles in indexed journals - Computational RNA Biology

Pages A, Dotu I, Guigo R, Eyras E. The discovery potential of RNA processing profiles. bioRxiv, 2016. DOI: 10.1101/049809.

2016

Other - Computational Biophysics

Khelashvili G, Stanley N, Sahai M, Medina J, LeVine MV, Shi L, De Fabritiis G, Weinstein H. Spontaneous Inward Opening of the Dopamine Transporter is Triggered by PIP2-Regulated Dynamics of the N-Terminus. Biophysical Journal, 110 (3): 625A-626A

2016

Original articles in indexed journals - Computational RNA Biology

Sebestyen E, Singh B, Miñana B, Pages A, Mateo F, Pujana MA, Valcarcel J, Eyras E. Large-scale analysis of genome and transcriptome alterations in multiple tumors unveils novel cancer-relevant splicing networks. Genome Research, 2016; 26 (6): 732-744 . PMID: 27197215 . DOI: 10.1101/ gr. 199935. 115.

2016



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