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Publications

Results 101 - 110 of about 138

Original articles in indexed journals - Structural Bioinformatics

Fernandez-Fuentes N, Querol E, Aviles FX, Sternberg MJE, Oliva B. Prediction of the Conformation and Geometry of Loops in Globular Proteins: Testing ArchDB, a Structural Classification of Looops. Proteins 2005; 60 (4): 746-57. PMID: 16021623 . DOI: 10.1002/prot.20516.

2005

Reviews in indexed journals - Structural Bioinformatics

Espadaler J, Fernandez-Fuentes N, Hermoso A, Querol E, Aviles FX, Sternberg MJE, Oliva B. ArchDB: automated protein loop classification as a tool for structural genomics. Nucleic Acids Res 2004; 32: D185-8.

2004

Original articles in indexed journals - Structural Bioinformatics

Soldevila M, Andrés AM, Blancher A, Calafell F, Ordoñez M, Pumarola M, Oliva B, Aramburu J, Bertranpetit J. Variation of the prion gene in chimpanzees and its implication for prion diseases. Neurosci Lett 2004; 355: 157-60.

2004

Original articles in indexed journals - Structural Bioinformatics

Andrés AM, Soldevila M, Navarro A, Kidd KK, Oliva B, Bertranpetit J. Positive selection in MAOA gene is human exclusive: determination of the putative amino acid change selected in the human lineage. Hum Genet 2004; 115: 377-86.

2004

Original articles in indexed journals - Structural Bioinformatics

Garriga D, Diez J, Oliva B. Modeling the helicase domain of Brome mosaic virus 1a replicase. J Mol Model 2004; 10 (5-6): 382-92.

2004

Original articles in indexed journals - Structural Bioinformatics

Carotti A, Stefanachi A, Raviña E, Sotelo E, Loza MI, Cadavid MI, Centeno NB, Nicolotti O. 8-Substituted-9-deazaxanthines as adenosine receptor ligands: design, synthesis and structure-affinity relationships at A2B. Eur J Med Chem 2004; 39: 879-87.

2004

Original articles in indexed journals - Structural Bioinformatics

Fernández-Fuentes N, Hermoso A, Espadaler J, Querol E, Avilés FX, Oliva B. Classification of common functional loops of kinase super-families. Proteins 2004; 56: 539-55.

2004

Reviews in indexed journals - Structural Bioinformatics - Computational Biochemistry - PharmacoInformatics

Centeno NB, Villa-Freixa J, Oliva B. Teaching structural bioinformatics at the undergraduate level. Biochem Mol Biol Edu, 2003; 31(6): 386-91

2003

Book chapters - Structural Bioinformatics

Aloy P, Oliva B, Russell RB. Structural Genomics and Structural Bioinformatics. In: Bioinformatics and Genomes: Current Perspectives. Norfolk: Horizon Scientific Press; 2003, Chapter 9.

2003

Original articles in indexed journals - Structural Bioinformatics

Gargallo R, Hünenberger P, Avilés F, Oliva B. Molecular dynamics simulation of highly charged proteins: Comparison of the particle-particle particle-mesh and reaction flied methods for the calculation of electrostatic interactions. Protein Sci 2003; 12: 2161-72.

2003



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